Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CCG07201.1 | CCG08038.1 | RSPPHO_00575 | RSPPHO_01412 | Phenylacetate--CoA ligase. | Phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | 0.912 |
| CCG07201.1 | CCG08551.1 | RSPPHO_00575 | RSPPHO_01925 | Phenylacetate--CoA ligase. | Indolepyruvate ferredoxin oxidoreductase; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates. | 0.627 |
| CCG07201.1 | CCG08552.1 | RSPPHO_00575 | RSPPHO_01926 | Phenylacetate--CoA ligase. | Pyruvate ferredoxin/flavodoxin oxidoreductase. | 0.571 |
| CCG07201.1 | nifJ | RSPPHO_00575 | RSPPHO_02736 | Phenylacetate--CoA ligase. | Pyruvate-flavodoxin oxidoreductase. | 0.430 |
| CCG07207.1 | CCG08551.1 | RSPPHO_00581 | RSPPHO_01925 | NAD-reducing hydrogenase diaphorase moiety largesubunit. | Indolepyruvate ferredoxin oxidoreductase; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates. | 0.540 |
| CCG07207.1 | CCG08552.1 | RSPPHO_00581 | RSPPHO_01926 | NAD-reducing hydrogenase diaphorase moiety largesubunit. | Pyruvate ferredoxin/flavodoxin oxidoreductase. | 0.500 |
| CCG07207.1 | CCG09137.1 | RSPPHO_00581 | RSPPHO_02511 | NAD-reducing hydrogenase diaphorase moiety largesubunit. | Succinate dehydrogenase subunit A; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. | 0.985 |
| CCG07207.1 | CCG09183.1 | RSPPHO_00581 | RSPPHO_02557 | NAD-reducing hydrogenase diaphorase moiety largesubunit. | 2-oxoglutarate synthase, alpha subunit. | 0.725 |
| CCG07207.1 | cdpA1 | RSPPHO_00581 | RSPPHO_01536 | NAD-reducing hydrogenase diaphorase moiety largesubunit. | CdpA1. | 0.985 |
| CCG07207.1 | cdpA2 | RSPPHO_00581 | RSPPHO_01537 | NAD-reducing hydrogenase diaphorase moiety largesubunit. | CdpA2. | 0.985 |
| CCG07207.1 | fdhA | RSPPHO_00581 | RSPPHO_00582 | NAD-reducing hydrogenase diaphorase moiety largesubunit. | Formate dehydrogenase, alpha subunit. | 0.994 |
| CCG07207.1 | nifJ | RSPPHO_00581 | RSPPHO_02736 | NAD-reducing hydrogenase diaphorase moiety largesubunit. | Pyruvate-flavodoxin oxidoreductase. | 0.999 |
| CCG08038.1 | CCG07201.1 | RSPPHO_01412 | RSPPHO_00575 | Phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | Phenylacetate--CoA ligase. | 0.912 |
| CCG08038.1 | CCG08551.1 | RSPPHO_01412 | RSPPHO_01925 | Phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | Indolepyruvate ferredoxin oxidoreductase; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates. | 0.589 |
| CCG08038.1 | CCG08552.1 | RSPPHO_01412 | RSPPHO_01926 | Phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | Pyruvate ferredoxin/flavodoxin oxidoreductase. | 0.539 |
| CCG08038.1 | nifJ | RSPPHO_01412 | RSPPHO_02736 | Phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | Pyruvate-flavodoxin oxidoreductase. | 0.430 |
| CCG08551.1 | CCG07201.1 | RSPPHO_01925 | RSPPHO_00575 | Indolepyruvate ferredoxin oxidoreductase; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates. | Phenylacetate--CoA ligase. | 0.627 |
| CCG08551.1 | CCG07207.1 | RSPPHO_01925 | RSPPHO_00581 | Indolepyruvate ferredoxin oxidoreductase; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates. | NAD-reducing hydrogenase diaphorase moiety largesubunit. | 0.540 |
| CCG08551.1 | CCG08038.1 | RSPPHO_01925 | RSPPHO_01412 | Indolepyruvate ferredoxin oxidoreductase; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates. | Phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | 0.589 |
| CCG08551.1 | CCG08552.1 | RSPPHO_01925 | RSPPHO_01926 | Indolepyruvate ferredoxin oxidoreductase; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates. | Pyruvate ferredoxin/flavodoxin oxidoreductase. | 0.983 |
page 1 of 4