STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pma1Cation-transporting ATPase Pma1, putative. (864 aa)    
Predicted Functional Partners:
CCG09833.1
Putative uncharacterized protein.
 
  
 0.762
CCG07617.1
Predicted signal transduction protein containing EFhand domain.
   
 
 0.611
CCG09157.1
Leucine-rich repeat.
   
 0.579
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
  
 
 0.575
CCG07843.1
Potassium uptake protein.
  
  
 0.549
pgk
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
  
 
 0.537
CCG08242.1
P-type conjugative transfer protein TrbG.
   
    0.530
CCG08724.1
Putative uncharacterized protein.
    
 0.503
CCG06745.1
HflK; HflC and HflK could encode or regulate a protease.
   
 0.495
CCG06747.1
HflC; HflC and HflK could regulate a protease.
   
 0.495
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
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