STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
emrAMultidrug resistance protein A. (392 aa)    
Predicted Functional Partners:
emrB
Multidrug resistance protein B; Belongs to the major facilitator superfamily.
 
 0.984
CCG08784.1
Drug resistance transporter EmrB/QacA subfamily; Belongs to the major facilitator superfamily.
 
 0.933
CCG07224.1
RND efflux system, outer membrane lipoprotein,NodT.
 
 0.858
CCG08183.1
RND efflux system, outer membrane lipoprotein,NodT.
 
 
 0.854
CCG08760.1
Major facilitator superfamily MFS_1.
 
 
 0.846
CCG07130.1
Major facilitator superfamily MFS_1.
 
 
 0.835
CCG09655.1
Outer membrane efflux protein.
  
 
 0.799
CCG09537.1
Type I secretion outer membrane protein, TolC.
  
 
 0.743
CCG09252.1
Outer membrane protein.
 
 
 0.706
CCG09060.1
Outer membrane efflux protein.
  
 
 0.661
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
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