STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG08707.1Peptidase propeptide and YPEB domain protein,putative. (123 aa)    
Predicted Functional Partners:
CCG08709.1
Sensor protein.
 
  
 0.941
CCG08708.1
Two component transcriptional regulator, winged helix family.
 
  
 0.864
ribB
GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
   
   0.577
CCG06810.1
CBS domain protein.
   
    0.531
CCG08273.1
Hemolysin.
   
    0.531
CCG08479.1
Putative uncharacterized protein.
 
   
 0.478
CCG08480.1
Diheme cytochrome c.
 
     0.472
CCG06879.1
Toluene tolerance.
   
   0.468
CCG08054.1
Toluene tolerance.
   
   0.468
CCG07604.1
Polyphosphate:AMP phosphotransferase.
 
   0.443
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
Server load: low (20%) [HD]