STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG08783.1Diguanylate cyclase/phosphodiesterase. (681 aa)    
Predicted Functional Partners:
CCG08293.1
Putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor domain.
 
0.810
CCG06720.1
Sensor protein.
    
 0.782
CCG08446.1
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S).
 
 
0.771
CCG07274.1
PAS:GGDEF.
 
 
0.763
CCG08782.1
Putative uncharacterized protein.
       0.737
CCG08701.1
Response regulator receiver modulated diguanylate cyclase.
 
   
 0.726
CCG09364.1
Sensor protein.
 
 
 0.718
CCG09848.1
Hypothetical 1041 kDa protein in hypE 3'region.
 
  
 0.718
CCG09039.1
Guanylate cyclase (GGDEF domain) with PAS/PAC sensor and Response Regulator Receiver modulation.
 
 
0.680
CCG07710.1
Putative diguanylate cyclase (GGDEF domain).
 
 
0.675
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.