STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG08791.1DNA methylase N-4/N-6. (817 aa)    
Predicted Functional Partners:
CCG08792.1
Type III restriction enzyme, res subunit.
 
     0.953
CCG08790.1
Excinuclease ABC, C subunit domain protein.
       0.789
CCG08789.1
Unnamed protein product.
       0.566
CCG08793.1
PilT protein domain protein.
       0.449
hsdR_2
Type I restriction-modification system (Restriction subunit).
 
   
 0.448
hsdS_2
Type I restriction-modification system (Specificity subunit).
 
   
 0.404
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.