STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG08805.1Glutamate synthase, NADH/NADPH, small subunit 2. (832 aa)    
Predicted Functional Partners:
CCG07093.1
Glutamate synthase (NADPH) large subunit.
 
 0.999
CCG08804.1
Glutamate synthase domain 2; Belongs to the glutamate synthase family.
 
 0.999
CCG07207.1
NAD-reducing hydrogenase diaphorase moiety largesubunit.
 
  
 0.934
CCG08803.1
Amidophosphoribosyl transferase.
  
 
 0.916
CCG09325.1
NADH-quinone oxidoreductase, F subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.
    
 0.910
fdhA
Formate dehydrogenase, alpha subunit.
   
 0.862
CCG07154.1
Putative uncharacterized protein.
  
 
 0.732
CCG08744.1
Ferredoxin.
    
 0.702
CCG09747.1
Ferredoxin.
    
 0.702
nifJ
Pyruvate-flavodoxin oxidoreductase.
 
  
 0.696
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
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