STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG08845.1Lipoprotein YaeC; Belongs to the nlpA lipoprotein family. (284 aa)    
Predicted Functional Partners:
CCG08351.1
Binding-protein-dependent transport systems inner membrane component.
 0.999
metN
Methionine import ATP-binding protein metN; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 0.997
CCG07199.1
NLPA lipoprotein.
  
  
 
0.906
cysN
Sulfate adenylyltransferase subunit 1 / adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
   
  
 0.567
cysC
Sulfate adenylyltransferase subunit 1; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
   
  
 0.567
CCG09035.1
O-acetylhomoserine/O-acetylserine sulfhydrylase.
  
    0.561
CCG08622.1
O-acetylhomoserine/O-acetylserine sulfhydrylase.
  
    0.554
CCG08657.1
O-acetylhomoserine/O-acetylserine sulfhydrylase.
  
    0.554
CCG08846.1
Dehydrogenase with different specificities; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.531
CCG09564.1
Extracellular solute-binding protein, family 3.
 
  
 0.503
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.