STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG08934.1Transposase IS66. (251 aa)    
Predicted Functional Partners:
CCG06573.1
Polysaccharide biosynthesis protein-like protein.
  
     0.588
CCG07188.1
PBS lyase HEAT-like repeat.
  
     0.583
CCG07191.1
Methyl-accepting chemotaxis protein.
  
     0.561
CCG08068.1
Putative uncharacterized protein.
  
     0.561
CCG08340.1
Transposase IS4 family protein.
 
     0.561
CCG09835.1
Putative uncharacterized protein.
  
     0.555
CCG09746.1
PBS lyase HEAT-like repeat.
  
     0.498
CCG09846.1
Sensor protein.
  
     0.494
CCG09443.1
Sterol-binding.
  
     0.456
CCG07190.1
CheW protein.
  
     0.443
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.