STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG09097.1Virulence-associated protein E, putative. (221 aa)    
Predicted Functional Partners:
CCG09096.1
Putative uncharacterized protein.
 
     0.935
ybeY
Putative metalloprotease Rru_A3772; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
  
  
 0.817
CCG06965.1
ParB domain protein nuclease.
 
     0.791
CCG06966.1
ParB family protein.
 
     0.791
CCG08219.1
Putative uncharacterized protein.
  
     0.690
CCG08213.1
Putative uncharacterized protein.
 
     0.670
CCG08217.1
Putative uncharacterized protein.
  
     0.624
CCG08229.1
Putative uncharacterized protein.
  
     0.607
CCG06963.1
Protein (Antirestriction protein).
 
     0.591
CCG08218.1
Conjugal transfer protein.
  
     0.583
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.