STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG09158.1NifQ protein. (220 aa)    
Predicted Functional Partners:
CCG08728.1
Cysteine sulfinate desulfinase/cysteine desulfurase and related enzyme.
  
 0.993
CCG09193.1
Aminotransferase, class V.
  
 0.993
CCG07025.1
Putative uncharacterized protein.
  
 
 0.988
CCG09747.1
Ferredoxin.
 
 0.978
CCG07668.1
Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
  
 
 0.977
CCG09457.1
Cysteine desulfurase; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.977
CCG09159.1
4Fe-4S ferredoxin, iron-sulfur binding.
 
  
 0.964
CCG09162.1
Nitrogenase molybdenum-iron cofactor biosynthesis protein.
 
  
 0.953
CCG09161.1
Dinitrogenase iron-molybdenum cofactor biosynthesis.
 
  
 0.949
CCG09163.1
Nitrogenase MoFe cofactor biosynthesis protein NifE; Belongs to the NifD/NifK/NifE/NifN family.
 
  
 0.948
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
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