STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG09302.1Biotin/lipoyl attachment. (131 aa)    
Predicted Functional Partners:
CCG09301.1
Glutaconyl-CoA decarboxylase.
 
  
 0.989
CCG09304.1
Carboxyl transferase.
 
 0.985
CCG09303.1
Unnamed protein product.
    
  0.978
CCG07983.1
Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.943
CCG08659.1
Enoyl-CoA hydratase.
  
 0.943
CCG08850.1
Unnamed protein product.
  
 0.930
CCG07601.1
Biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
  
 
0.926
CCG06920.1
Carboxyl transferase.
 
 0.925
CCG09168.1
MaoC-like dehydratase.
  
 
 0.914
CCG09334.1
Biotin--acetyl-CoA-carboxylase ligase.
 
  
 0.883
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
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