STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG09448.1Response regulator receiver:Metal-dependent phosphohydrolase, HD subdomain. (359 aa)    
Predicted Functional Partners:
CCG09039.1
Guanylate cyclase (GGDEF domain) with PAS/PAC sensor and Response Regulator Receiver modulation.
 
 0.967
CCG09363.1
Response regulator.
  
0.946
CCG07934.1
GGDEF domain.
  
 0.939
CCG09689.1
Putative uncharacterized protein.
 
 0.938
CCG06843.1
Response regulator.
  
 0.923
CCG09511.1
Putative diguanylate cyclase (GGDEF domain).
  
 0.916
CCG06720.1
Sensor protein.
     0.913
CCG07424.1
Response regulator containing a CheY-like receiver domain and a GGDEF domain.
  
 0.885
CCG06683.1
GGDEF domain.
  
 0.875
CCG09069.1
FOG: PAS/PAC domain.
 
 0.871
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.