STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG09449.1Putative ABC-type sugar transport system,periplasmic component. (486 aa)    
Predicted Functional Partners:
CCG08512.1
Spermidine/putrescine ABC transporter ATP-binding subunit.
  
 
 0.883
CCG09450.1
Putative sugar uptake ABC transporter periplasmic solute-binding protein.
  
 0.832
CCG09448.1
Response regulator receiver:Metal-dependent phosphohydrolase, HD subdomain.
       0.541
CCG06857.1
Transcriptional regulator, LacI family.
 
  
 0.524
CCG08328.1
Phosphoenolpyruvate--protein phosphotransferase.
 
  
 0.491
CCG09759.1
PfkB domain protein.
 
  
 0.470
CCG09414.1
Ribulose 1,5-bisphosphate carboxylase large subunit.
 
     0.453
CCG09758.1
ABC-type sugar transport system, periplasmic component.
 
  
 0.425
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.