STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG09489.1NADH-ubiquinone oxidoreductase, chain 4L. (127 aa)    
Predicted Functional Partners:
CCG09490.1
Na+/H+ antiporter MnhB subunit-related protein.
 
 
 0.999
CCG09493.1
Cation antiporter.
 
 
 0.999
CCG09492.1
Multiple resistance and pH regulation protein F.
 
 
 0.998
CCG09488.1
NADH dehydrogenase (Quinone).
 
 
 0.997
CCG09485.1
NADH dehydrogenase (Quinone).
 
 
 0.996
CCG09487.1
NADH dehydrogenase (Quinone).
 
 
 0.996
CCG09491.1
Putative multicomponent Na+-H+ antiporter subunit A.
 
 
 0.980
CCG09331.1
NADH-plastoquinone oxidoreductase, chain 5.
  
 
 0.969
CCG09486.1
Putative uncharacterized protein.
       0.800
nifJ
Pyruvate-flavodoxin oxidoreductase.
  
 
 0.631
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
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