STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG09499.1Putative extracellular solute-binding protein. (280 aa)    
Predicted Functional Partners:
CCG08619.1
Amino acid ABC transporter, permease protein.
 
 
 0.816
CCG08618.1
Amino acid ABC transporter, permease protein,3-TM region, His/Glu/Gln/Arg/opine.
 
 
 0.808
CCG09568.1
Binding-protein-dependent transport system inner membrane component.
 
 
 0.761
aapQ
General L-amino acid transport system permease protein AapQ.
 
 
 0.754
CCG07821.1
Amino acid ABC transporter, permease protein,3-TM region, His/Glu/Gln/Arg/opine.
 
 
 0.753
CCG08620.1
ABC transporter component.
 
 
 0.745
CCG08614.1
Lysine-arginine-ornithine-binding periplasmic protein.
  
     0.732
CCG09565.1
ABC transporter component.
 
 
 0.701
CCG07822.1
ABC transporter component.
 
 
 0.672
CCG09787.1
ABC transporter component.
 
 
 0.627
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.