STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
thiOGlycine oxidase ThiO. (418 aa)    
Predicted Functional Partners:
CCG09562.1
Sarcosine oxidase, alpha subunit family; Belongs to the GcvT family.
 
 0.992
CCG08803.1
Amidophosphoribosyl transferase.
 
 
 0.967
CCG08804.1
Glutamate synthase domain 2; Belongs to the glutamate synthase family.
 
 
 0.957
CCG08930.1
Aminomethyltransferase; Belongs to the GcvT family.
 
 
 0.921
CCG08931.1
Sarcosine oxidase, delta subunit.
 
 
 0.879
CCG08929.1
Putative sarcosine oxidase gamma subunit protein (SoxG).
 
 
 0.853
thiG
Thiazole biosynthesis protein thiG; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.
  
  
 0.771
CCG08809.1
Putative HTH-type transcriptional regulator.
 
  
 0.608
CCG07008.1
NAD(FAD)-dependent.
  
 
 0.592
CCG09564.1
Extracellular solute-binding protein, family 3.
  
  
 0.583
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.