STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG09616.1Extracellular endo alpha-1 4 polygalactosaminidase or related polysaccharide hydrolase-like. (369 aa)    
Predicted Functional Partners:
cysS
Cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
     
 0.910
CCG07225.1
Cyclic nucleotide-binding domain (CNMP-BD) protein.
  
     0.773
CCG07090.1
Putative uncharacterized protein.
  
     0.765
CCG07595.1
Heat shock protein DnaJ-like.
  
     0.748
CCG07558.1
Adenylate/guanylate cyclase.
  
     0.719
CCG09618.1
FAD dependent oxidoreductase.
       0.714
CCG06818.1
Putative uncharacterized protein.
  
     0.711
CCG09119.1
Uroporphyrinogen III synthase HEM4.
  
     0.706
CCG08499.1
Putative uncharacterized protein.
  
     0.696
CCG09091.1
Putative uncharacterized protein.
  
     0.660
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
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