STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG09640.1Putative uncharacterized protein. (491 aa)    
Predicted Functional Partners:
CCG08843.1
Putative uncharacterized protein.
     
 0.910
CCG07970.1
Aminotransferase.
     
 0.902
CCG08617.1
Aminotransferase.
     
 0.902
hisC
Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
     
  0.900
CCG09260.1
Prephenate dehydrogenase.
     
  0.800
CCG09641.1
GCN5-related N-acetyltransferase.
       0.472
CCG09642.1
Permease of the major facilitator superfamily.
       0.472
CCG09643.1
L-glutamine synthetase.
       0.455
CCG09644.1
L-glutamine synthetase.
       0.455
CCG08996.1
Intracellular protease, PFpI family protein,putative.
    
   0.430
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.