STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phaZ2PhaZ2. (505 aa)    
Predicted Functional Partners:
phbC
Poly-beta-hydroxybutyrate polymerase.
 
  
 0.972
CCG08779.1
Poly(R)-hydroxyalkanoic acid synthase, class I.
 
  
 0.970
CCG09045.1
Alpha/beta hydrolase fold.
 
  
 0.933
CCG09668.1
Uncharacterized conserved protein UCP006173; Belongs to the UPF0260 family.
       0.799
CCG07939.1
Polyhydroxyalkanoate synthesis repressor PhaR.
 
   
 0.755
CCG07618.1
3-hydroxybutyrate dehydrogenase.
  
   
 0.653
CCG09047.1
3-oxoacyl-[acyl-carrier-protein] reductase.
  
   
 0.598
clpX
ATP-dependent Clp protease ATP-binding subunit clpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.
  
    0.459
CCG09666.1
Glutathione S-transferase family protein.
       0.446
CCG07489.1
Alpha/beta hydrolase fold.
  
     0.416
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.