STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG09672.1Binding-protein-dependent transport systems inner membrane component. (378 aa)    
Predicted Functional Partners:
CCG09671.1
Binding-protein-dependent transport systems inner membrane component.
  
 0.986
CCG09670.1
ATP-binding component of a transport system; Belongs to the ABC transporter superfamily.
  
 0.974
CCG08133.1
Extracellular solute-binding protein, family 5.
  
 0.950
CCG09432.1
Binding-protein-dependent transport systems inner membrane component.
   
 0.799
CCG09431.1
ABC transporter component.
   
 0.726
CCG08883.1
ABC-type uncharacterized transport system,duplicated ATPase component; Belongs to the ABC transporter superfamily.
 
     0.722
CCG09669.1
Surface presentation of antigens (SPOA) protein.
       0.603
CCG09673.1
Putative uncharacterized protein.
       0.572
oppC
Oligopeptide transport system permease protein OppC.
 
   
 0.514
CCG09430.1
ABC transporter component.
 
     0.455
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.