STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG09691.1Putative uncharacterized protein. (316 aa)    
Predicted Functional Partners:
CCG09692.1
Dihydroorotase.
  
  
 0.603
CCG09217.1
N-acetylmuramoyl-L-alanine amidase.
   
  
 0.542
CCG07949.1
Putative uncharacterized protein.
  
     0.491
CCG08562.1
Putative uncharacterized protein.
  
     0.483
rpmJ
50S ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family.
  
  
 0.454
CCG08039.1
Putative uncharacterized protein.
  
     0.446
CCG08912.1
Cytosol aminopeptidase family protein.
  
     0.436
CCG07941.1
GTPases (G3E family).
  
   0.409
CCG07241.1
Putative uncharacterized protein.
 
     0.401
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.