STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG09815.1Putative uncharacterized protein. (315 aa)    
Predicted Functional Partners:
CCG09814.1
Putative uncharacterized protein.
 
   
 0.952
CCG09817.1
ABC transporter component.
  
  
 0.836
CCG09812.1
KpsF/GutQ.
       0.786
CCG09813.1
KpsF/GutQ.
       0.786
CCG09811.1
3'-5' exonuclease.
       0.780
CCG09818.1
Sigma-54 (RpoN); Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
  
  
 0.767
CCG07474.1
Putative uncharacterized protein.
 
 
   0.766
CCG08152.1
Putative uncharacterized protein.
  
     0.760
CCG09722.1
Putative uncharacterized protein.
  
     0.733
CCG08396.1
Putative uncharacterized protein.
  
     0.721
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.