STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG06570.1Putative uncharacterized protein. (220 aa)    
Predicted Functional Partners:
CCG06569.1
Methyl-accepting chemotaxis protein.
       0.773
CCG07781.1
Cytochrome c1.
   
 
 0.460
CCG07782.1
Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
    
 
 0.454
CCG07232.1
Putative uncharacterized protein.
   
 
 0.442
CCG07258.1
Hypothetical phage protein.
   
 
 0.442
CCG07266.1
Condensin subunit Smc.
   
 
 0.442
CCG08422.1
Putative uncharacterized protein.
   
 
 0.442
CCG08786.1
Putative uncharacterized protein.
   
 
 0.442
CCG08794.1
BdrR.
   
 
 0.442
CCG09088.1
Putative uncharacterized protein.
   
 
 0.442
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
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