STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG06571.1Chemotaxis sensory transducer. (345 aa)    
Predicted Functional Partners:
CCG07083.1
CheW protein.
 
  
 0.712
CCG08155.1
CheW protein.
 
  
 0.712
CCG07614.1
Chemotaxis signal transduction protein.
 
  
 0.701
CCG06834.1
Response regulator receiver domain protein (CheY).
  
  
  0.689
CCG09848.1
Hypothetical 1041 kDa protein in hypE 3'region.
    
 0.675
CCG06740.1
CheA Signal Transduction Histidine Kinases (STHK).
    
 0.665
CCG07086.1
CheW protein.
    
 0.661
CCG07190.1
CheW protein.
    
 0.661
CCG06737.1
MCP methyltransferase, CheR-type.
    
  0.660
cheD
Probable chemoreceptor glutamine deamidase cheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.
    
  0.660
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.