STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG06572.1Glycosyl transferase-like protein. (217 aa)    
Predicted Functional Partners:
CCG06573.1
Polysaccharide biosynthesis protein-like protein.
       0.787
CCG06589.1
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family.
 
  
 0.784
CCG06577.1
Glycosyl transferase-like protein.
 
     0.686
CCG06615.1
Putative glycosyl transferase (Glycosyl transferase family 2).
 
  
 0.647
CCG06616.1
Putative glycosyl transferase (Glycosyl transferase family 2).
  
     0.608
CCG09074.1
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
 
  
 0.578
CCG07952.1
Polysaccharide biosynthesis protein CapD.
  
  
 0.513
rfbC
dTDP-4-dehydrorhamnose 3,5-epimerase, putative.
 
  
 0.497
CCG08555.1
Glycosyltransferase involved in cell wall biogenesis.
 
  
 0.486
CCG06592.1
Glycosyl transferase-like protein.
  
 0.444
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.