STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000745455_01464Unannotated protein. (333 aa)    
Predicted Functional Partners:
GCA_000745455_01567
Unannotated protein.
   
   0.747
GCA_000745455_01884
Unannotated protein.
    
  0.624
GCA_000745455_01865
Unannotated protein.
    
  0.577
GCA_000745455_01354
Unannotated protein.
  
 
 0.527
GCA_000745455_00213
Unannotated protein.
  
  
 0.480
GCA_000745455_01177
Unannotated protein.
  
 
  0.437
GCA_000745455_01237
Unannotated protein.
    
  0.437
GCA_000745455_01878
Unannotated protein.
    
 0.435
GCA_000745455_01247
Unannotated protein.
    
 0.423
GCA_000745455_00670
Unannotated protein.
   
 0.421
Your Current Organism:
Mesoaciditoga lauensis
NCBI taxonomy Id: 1150474
Other names: M. lauensis cd-1655R = DSM 25116, Mesoaciditoga lauensis DSM 25116, Mesoaciditoga lauensis DSM 25116 = cd-1655R, Mesoaciditoga lauensis cd-1655R, Mesoaciditoga lauensis cd-1655R = DSM 25116, Thermotogales bacterium cd-1655R
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.