STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EOR93278.1Putative transcriptional regulator, AsnC family. (158 aa)    
Predicted Functional Partners:
EOR94270.1
Pyruvate-flavodoxin oxidoreductase.
    
 0.844
EOR93279.1
Aldehyde dehydrogenase B; Belongs to the aldehyde dehydrogenase family.
  
 
  0.620
EOR94042.1
NADP-dependent malic enzyme.
 
  
  0.522
EOR94484.1
Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit.
    
 0.464
EOR95666.1
Uroporphyrinogen-III methyltransferase.
  
 
 0.439
EOR92521.1
3-isopropylmalate dehydratase small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily.
    
  0.432
leuC
3-isopropylmalate dehydratase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.
    
 0.431
recG
ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.
    
 0.428
EOR93951.1
Glutamate synthase [NADPH] large chain.
     
 0.428
trpF
Phosphoribosylanthranilate isomerase; Belongs to the TrpF family.
    
 0.415
Your Current Organism:
Arcticibacter svalbardensis
NCBI taxonomy Id: 1150600
Other names: A. svalbardensis MN12-7, Arcticibacter svalbardensis MN12-7, Sphingobacterium sp. MN12-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.