STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vapC-2Putative toxin protein, VapC-like; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. (133 aa)    
Predicted Functional Partners:
SMUL_1323
Putative antitoxin protein, VagC family.
 
 
 0.994
SMUL_1191
VapB protein (antitoxin to VapC).
 
 
 0.976
SMUL_1239
Hypothetical protein.
   
 
 0.613
SMUL_1322
ABC transporter, ATP-binding subunit, PltJ-like.
       0.587
SMUL_1321
ABC transporter, ATP-binding subunit, PltI-like.
       0.584
SMUL_1320
ABC transporter membrane fusion protein, PltH-like.
       0.581
SMUL_1325
Hypothetical protein.
       0.522
SMUL_1319
Putative aspartate aminotransferase.
       0.422
Your Current Organism:
Sulfurospirillum multivorans
NCBI taxonomy Id: 1150621
Other names: S. multivorans DSM 12446, Sulfurospirillum multivorans DSM 12446, Sulfurospirillum multivorans str. DSM 12446, Sulfurospirillum multivorans strain DSM 12446
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