STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMUL_2253Putative zinc metallopeptidase; 8 TM helices (TMHMM). (299 aa)    
Predicted Functional Partners:
SMUL_2252
Bactofilin domain-containing protein.
 
   
 0.920
mfd
Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.
     
 0.850
secF
Protein-export membrane protein SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.
 
   
 0.850
SMUL_0383
Putative flagellar motor switch phosphatase FliY.
   
   0.849
secD
Protein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.
 
   
 0.847
folC
Tetrahydrofolate synthase.
  
    0.816
SMUL_2249
Putative endonuclease III.
       0.814
SMUL_2250
Metallophosphatase domain-containing protein.
       0.814
lptE
Putative lipopolysaccharide-assembly protein LptE.
       0.814
leuS
leucine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.814
Your Current Organism:
Sulfurospirillum multivorans
NCBI taxonomy Id: 1150621
Other names: S. multivorans DSM 12446, Sulfurospirillum multivorans DSM 12446, Sulfurospirillum multivorans str. DSM 12446, Sulfurospirillum multivorans strain DSM 12446
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.