STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG39770.1Membrane-bound lytic murein transglycosylase. (395 aa)    
Predicted Functional Partners:
CCG39771.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.842
CCG39772.1
FxsA cytoplasmic membrane protein.
       0.644
CCG39773.1
Uracil-DNA glycosylase.
       0.521
CCG40859.1
Putative Zn-dependent protease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
    0.521
CCG39775.1
Cell division protein.
 
   
 0.487
CCG39776.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.451
gltB
Glutamate synthase (NADPH) large chain (NADPH-GOGAT); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
      
 0.446
cysK
Pyridoxal-phosphate (PLP) dependent enzymes family; Function of strongly homologous gene; enzyme.
       0.441
CCG41562.1
Membrane carboxypeptidase.
    
 
 0.422
CCG40374.1
Protein-disulfide isomerase.
 
    0.410
Your Current Organism:
Phaeospirillum molischianum
NCBI taxonomy Id: 1150626
Other names: P. molischianum DSM 120, Phaeospirillum molischianum DSM 120, Phaeospirillum molischianum str. DSM 120, Phaeospirillum molischianum strain DSM 120
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.