STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG41245.1Short-chain dehydrogenase/reductase SDR. (277 aa)    
Predicted Functional Partners:
CCG40380.1
Putative Aspartate racemase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 
 0.953
CCG41243.1
Phosphoglycerate mutase.
 
     0.877
CCG41244.1
Short chain dehydrogenase.
 
 
0.872
ydbK
Putative 2-oxoacid-flavodoxin fused oxidoreductase:conserved protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 
  0.842
ACAD11
acyl-CoA dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
   
 0.828
ajuA
Polyketide synthase.
  
 
 0.801
wcbR
Capsular polysaccharide biosynthesis fatty acid synthase.
  
 
 0.758
CCG41512.1
Dehydrogenase with different specificities.
 
 
 0.708
CCG40384.1
Erythronolide synthase, modules 3 and 4 (fragment).
 
 
 0.672
fixR
Protein fixR.
 
 
 0.655
Your Current Organism:
Phaeospirillum molischianum
NCBI taxonomy Id: 1150626
Other names: P. molischianum DSM 120, Phaeospirillum molischianum DSM 120, Phaeospirillum molischianum str. DSM 120, Phaeospirillum molischianum strain DSM 120
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