STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bioDDethiobiotin synthetase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring. (204 aa)    
Predicted Functional Partners:
CCG41303.1
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
 0.999
bioB
Biotin synthetase (Biotin synthase); Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.
 
 
 0.998
CCG41305.1
SAM-dependent methyltransferase.
 
 0.996
CCG41307.1
Putative 8-amino-7-oxononanoate synthase/2-amino-3-ketobutyrate coenzyme A ligase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 
 0.984
CCG40309.1
Uncharacterized aminotransferase y4uB; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
 0.981
CCG42202.1
Radical SAM domain protein.
  
 
 0.958
CCG41306.1
Predicted hydrolase or acyltransferase.
 
 
 0.919
wcbT
Putative polyketide synthase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 
 0.882
hemA
5-aminolevulinate synthase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
 
 0.878
hemA-2
5-aminolevulinic acid synthase (ALAS); Function of strongly homologous gene; enzyme.
 
 
 0.878
Your Current Organism:
Phaeospirillum molischianum
NCBI taxonomy Id: 1150626
Other names: P. molischianum DSM 120, Phaeospirillum molischianum DSM 120, Phaeospirillum molischianum str. DSM 120, Phaeospirillum molischianum strain DSM 120
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