STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG41343.1Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase, gamma subunit. (210 aa)    
Predicted Functional Partners:
ydbK
Putative 2-oxoacid-flavodoxin fused oxidoreductase:conserved protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 0.999
iorA
Indolepyruvate oxidoreductase subunit iorA; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.
 
 0.989
CCG39995.1
Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase, beta subunit.
 
 0.970
CCG39996.1
627aa long 2-oxoacid--ferredoxin oxidoreductasealpha subunit.
 
 0.936
gltB
Glutamate synthase (NADPH) large chain (NADPH-GOGAT); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
    
 0.916
CCG41345.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
    
 0.864
tme
NADP-dependent malic enzyme; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
    
 0.848
icmF
METHYLMALONYL-COA MUTASE; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly.
  
 
 0.841
adhE
Aldehyde-alcohol dehydrogenase (Includes: Alcohol dehydrogenase; Acetaldehyde dehydrogenase (acetylating); Pyruvate-formate-lyase deactivase); In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.834
pdhB
Pyruvate dehydrogenase E1 component, beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
     
 0.828
Your Current Organism:
Phaeospirillum molischianum
NCBI taxonomy Id: 1150626
Other names: P. molischianum DSM 120, Phaeospirillum molischianum DSM 120, Phaeospirillum molischianum str. DSM 120, Phaeospirillum molischianum strain DSM 120
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