STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG41618.14-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family. (517 aa)    
Predicted Functional Partners:
CCG41619.1
ADP-heptose.
 
   
 0.867
ugpQ
Glycerophosphoryl diester phosphodiesterase.
       0.780
CCG40339.1
Glycosyltransferase involved in cell wall biogenesis.
 
 
 0.763
CCG41159.1
Glycosyl transferase (fragment).
 
   
 0.627
CCG41725.1
Lauroyl/myristoyl acyltransferase.
 
  
 0.607
CCG42586.1
Putative enzyme; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 
 0.588
CCG41276.1
Superfamily protein.
 
   
 0.576
fmt
Methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
  
  
 0.573
CCG41794.1
4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family.
 
     0.570
CCG40573.1
Sulfotransferase.
  
 
 0.568
Your Current Organism:
Phaeospirillum molischianum
NCBI taxonomy Id: 1150626
Other names: P. molischianum DSM 120, Phaeospirillum molischianum DSM 120, Phaeospirillum molischianum str. DSM 120, Phaeospirillum molischianum strain DSM 120
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