STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slyATranscriptional regulator slyA. (153 aa)    
Predicted Functional Partners:
CCG42227.1
Drug resistance transporter, EmrB/QacA subfamily; Belongs to the major facilitator superfamily.
 
   
 0.829
CCG42228.1
HlyD family secretion protein.
 
   
 0.818
CCG42226.1
Putative UspA domain protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
     
 0.785
CCG41995.1
Putative transcriptional regulator, MarR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
     0.742
rcp1
Two-component response transcriptional regulator rcp1; Function of homologous gene experimentally demonstrated in an other organism; regulator.
     
 0.530
CCG42230.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.490
cstA
Carbon starvation protein A.
       0.490
CCG39586.1
Rubredoxin.
    
 0.438
cbbT
Transketolase (TK); Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
   
 
 0.429
CCG40919.1
Flavin reductase-like, FMN-binding.
    
 0.418
Your Current Organism:
Phaeospirillum molischianum
NCBI taxonomy Id: 1150626
Other names: P. molischianum DSM 120, Phaeospirillum molischianum DSM 120, Phaeospirillum molischianum str. DSM 120, Phaeospirillum molischianum strain DSM 120
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