STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG42473.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (403 aa)    
Predicted Functional Partners:
CCG42471.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
 
 0.999
CCG42474.1
CRISPR-associated protein, Cas5e family.
 
 
 0.999
CCG42472.1
Putative Cse2 family CRISPR-associated protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 
 0.998
CCG42470.1
CRISPR-associated helicase Cas3.
 
 
 0.995
cas1-2
Conserved hypothetical protein; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.
 
  
 0.980
CCG42475.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
  
 0.963
CCG39874.1
CRISPR-associated helicase, Cas3 family.
  
 
 0.917
CCG42478.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
  
 0.859
CCG42469.1
Putative transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
       0.643
cycJ
Cytochrome c-type biogenesis protein cycJ; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. Belongs to the CcmE/CycJ family.
   
  
 0.618
Your Current Organism:
Phaeospirillum molischianum
NCBI taxonomy Id: 1150626
Other names: P. molischianum DSM 120, Phaeospirillum molischianum DSM 120, Phaeospirillum molischianum str. DSM 120, Phaeospirillum molischianum strain DSM 120
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.