STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG42615.1Inactivated superfamily I helicase. (973 aa)    
Predicted Functional Partners:
CCG42958.1
ATP-dependent exoDNAse beta subunit; Belongs to the helicase family. UvrD subfamily.
  
 0.969
CCG39737.1
Superfamily I DNA and RNA helicase.
   
  0.845
uvrD
Putative DNA helicase II homolog; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
   
  0.845
CCG41688.1
Outer membrane lipoprotein-sorting protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
 
     0.787
CCG42144.1
Small protein A (TmRNA-binding).
  
     0.732
CCG41329.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.727
lptD
Organic solvent tolerance protein OstA; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.
  
     0.688
CCG40290.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function; Belongs to the UPF0335 family.
  
     0.685
atpH
ATP synthase subunit delta, membrane-bound, F1 sector; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
   
   0.685
CCG42279.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.677
Your Current Organism:
Phaeospirillum molischianum
NCBI taxonomy Id: 1150626
Other names: P. molischianum DSM 120, Phaeospirillum molischianum DSM 120, Phaeospirillum molischianum str. DSM 120, Phaeospirillum molischianum strain DSM 120
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