STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG42725.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (126 aa)    
Predicted Functional Partners:
CCG42728.1
Conjugal transfer protein (fragment).
 
     0.945
CCG42726.1
Hypothetical protein; No homology to any previously reported sequences.
 
   
 0.944
CCG42727.1
Exported hypothetical protein; No homology to any previously reported sequences.
 
     0.940
CCG42760.1
P-type conjugative transfer protein TrbG.
 
   
 0.795
CCG42761.1
Hypothetical protein; No homology to any previously reported sequences.
 
   
 0.790
CCG42758.1
Conjugal transfer protein; TrbL.
 
     0.783
trbF
Conjugal transfer protein; TrbF.
 
     0.782
CCG42762.1
Putative conjugal transfer protein trbI (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
   
 0.782
CCG42757.1
P-type conjugative transfer protein TrbJ (fragment).
 
     0.780
CCG43176.1
Hypothetical protein; No homology to any previously reported sequences.
 
     0.779
Your Current Organism:
Phaeospirillum molischianum
NCBI taxonomy Id: 1150626
Other names: P. molischianum DSM 120, Phaeospirillum molischianum DSM 120, Phaeospirillum molischianum str. DSM 120, Phaeospirillum molischianum strain DSM 120
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.