STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG43326.1Putative porphyrin biosynthetic protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (391 aa)    
Predicted Functional Partners:
CCG43325.1
Putative Porphyrin biosynthetic protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 
 0.933
cobT
Aerobic cobaltochelatase cobT subunit (cobalamin biosynthesis); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
 
 0.839
CCG43329.1
Putative DNA polymerase III subunit alpha; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
     0.795
CCG43327.1
Hypothetical protein; No homology to any previously reported sequences; Belongs to the sigma-70 factor family.
       0.757
CCG43328.1
Hypothetical protein; No homology to any previously reported sequences.
       0.757
bchD
Magnesium-chelatase 60 kDa subunit (Mg-protoporphyrin IX chelatase) (Mg-chelatase subunit D); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
 
 0.695
CCG41983.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
 
 0.695
CCG43313.1
Putative DNA helicase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
   
 0.687
CCG43347.1
Putative exonuclease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
     0.613
CCG43281.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.581
Your Current Organism:
Phaeospirillum molischianum
NCBI taxonomy Id: 1150626
Other names: P. molischianum DSM 120, Phaeospirillum molischianum DSM 120, Phaeospirillum molischianum str. DSM 120, Phaeospirillum molischianum strain DSM 120
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