STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH22155.1Monooxygenase FAD-binding; Function of strongly homologous gene; enzyme. (383 aa)    
Predicted Functional Partners:
CCH22154.1
Transcriptional regulator, TetR family; Function of strongly homologous gene; regulator.
 
     0.679
CCH20171.1
FAD-binding protein monooxygenase; Function of strongly homologous gene; enzyme.
  
     0.550
CCH20190.1
FAD-binding monooxygenase; Function of strongly homologous gene; enzyme.
  
     0.530
paaE
Phenylacetic acid degradation NADH oxidoreductase paaE; Function of strongly homologous gene; cell process.
     
 0.525
CCH18610.1
Monooxygenase, FAD-binding protein; Function of strongly homologous gene; enzyme.
  
     0.462
CCH22152.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.417
sigE
RNA polymerase sigma-E factor; Function of strongly homologous gene; factor; Belongs to the sigma-70 factor family. ECF subfamily.
       0.417
kynU
Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively.
  
 
 0.414
CCH18740.1
Protein of unknown function; No homology to any previously reported sequences.
  
   0.402
Your Current Organism:
Micromonospora lupini
NCBI taxonomy Id: 1150864
Other names: M. lupini str. Lupac 08, Micromonospora lupini Lupac 08, Micromonospora lupini str. Lupac 08, Micromonospora lupini strain Lupac 08, Micromonospora sp. Lupac 08
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.