STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH15963.1Conserved hypothetical protein (Roadblock family protein); Homologs of previously reported genes of unknown function. (134 aa)    
Predicted Functional Partners:
CCH15962.1
Conserved hypothetical protein (ATP-binding domain); Homologs of previously reported genes of unknown function.
 
   
 0.980
CCH15965.1
Conserved hypothetical protein (ATP/GTP-binding protein); Homologs of previously reported genes of unknown function.
 
 
 0.975
CCH21364.1
ATP/GTP-binding protein; Function of strongly homologous gene; cell process.
 
 
 0.944
CCH21701.1
ATP/GTP-binding protein; Function of strongly homologous gene; cell process.
 
 
 0.943
CCH20033.1
Conserved hypothetical protein (ATP/GTP-binding protein); Homologs of previously reported genes of unknown function.
 
   0.939
CCH20958.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
   0.939
CCH15964.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
  
 0.924
CCH18011.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
  
 0.804
CCH20959.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
  
 0.804
CCH21365.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
  
 0.804
Your Current Organism:
Micromonospora lupini
NCBI taxonomy Id: 1150864
Other names: M. lupini str. Lupac 08, Micromonospora lupini Lupac 08, Micromonospora lupini str. Lupac 08, Micromonospora lupini strain Lupac 08, Micromonospora sp. Lupac 08
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.