STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH17413.1Sodium/hydrogen exchanger; Function of strongly homologous gene; transporter. (431 aa)    
Predicted Functional Partners:
CCH17414.1
Phosphatase; Function of strongly homologous gene; enzyme.
       0.593
CCH17513.1
Putative Leucine-rich repeat protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
   
 0.496
CCH19046.1
GTP-binding Ras family protein; Function of strongly homologous gene; cell process.
   
 0.496
CCH20769.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
    0.495
CCH22134.1
ATPase, P-type (Transporting), HAD superfamily; Function of strongly homologous gene; transporter.
   
 
 0.487
CCH21710.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
    0.456
CCH20767.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.444
CCH17411.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.439
CCH17452.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.431
CCH19074.1
Putative thioredoxin reductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.413
Your Current Organism:
Micromonospora lupini
NCBI taxonomy Id: 1150864
Other names: M. lupini str. Lupac 08, Micromonospora lupini Lupac 08, Micromonospora lupini str. Lupac 08, Micromonospora lupini strain Lupac 08, Micromonospora sp. Lupac 08
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