STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH20812.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (399 aa)    
Predicted Functional Partners:
CCH21939.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.682
CCH21818.1
CDP-alcohol phosphatidyltransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
     0.663
rpiB
Ribose-5-phosphate isomerase; Function of strongly homologous gene; enzyme.
       0.658
CCH18717.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.653
CCH21940.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.632
CCH20514.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.628
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
    
  0.611
CCH21941.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.604
CCH21987.1
Adenylate/guanylate cyclase; Function of strongly homologous gene; enzyme.
  
     0.586
CCH16594.1
Putative DivIVA domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.581
Your Current Organism:
Micromonospora lupini
NCBI taxonomy Id: 1150864
Other names: M. lupini str. Lupac 08, Micromonospora lupini Lupac 08, Micromonospora lupini str. Lupac 08, Micromonospora lupini strain Lupac 08, Micromonospora sp. Lupac 08
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.