STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH21517.1Two-component system response regulator receiver; Function of strongly homologous gene; regulator. (414 aa)    
Predicted Functional Partners:
CCH21516.1
Two-component system sensor protein; Function of strongly homologous gene; enzyme.
 
 
 0.990
rcp1
Response regulator; Function of strongly homologous gene; regulator.
 
   
 0.973
CCH21514.1
Inositol monophosphatase; Function of strongly homologous gene; enzyme.
       0.874
CCH18189.1
Two-component response regulator receiver sensor signal transduction histidine kinase; Function of strongly homologous gene; enzyme.
 
 0.801
CCH18299.1
Two-component system response regulator; Function of strongly homologous gene; regulator.
 
 
  0.795
CCH21148.1
Sulphate transporter/antisigma-factor antagonist; Function of strongly homologous gene; factor.
  
  0.781
CCH15383.1
Hybrid sensory histidine kinase in two-component regulatory system with GAF sensor; Function of strongly homologous gene; regulator.
 
 
 0.765
rsbV
Anti-sigma-B factor antagonist; Function of homologous gene experimentally demonstrated in an other organism; factor; Belongs to the anti-sigma-factor antagonist family.
  
  0.723
CCH17415.1
PAS/PAC sensor hybrid histidine kinase; Function of strongly homologous gene; enzyme.
 
0.716
CCH15382.1
Stage II sporulation E family protein; Function of strongly homologous gene; cell process.
 
0.698
Your Current Organism:
Micromonospora lupini
NCBI taxonomy Id: 1150864
Other names: M. lupini str. Lupac 08, Micromonospora lupini Lupac 08, Micromonospora lupini str. Lupac 08, Micromonospora lupini strain Lupac 08, Micromonospora sp. Lupac 08
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.