STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFI59709.1Thioredoxin reductase. (454 aa)    
Predicted Functional Partners:
SFK96365.1
2-oxoglutarate decarboxylase.
  
 0.999
SFI59681.1
2Fe-2S iron-sulfur cluster binding domain-containing protein.
 
  0.994
SFI59652.1
Glycine/D-amino acid oxidase.
 
  0.989
SFK28390.1
2-oxoisovalerate dehydrogenase E1 component.
  
 0.988
SFI59742.1
4-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family.
 
  
  0.986
SFI59770.1
Proline racemase; Belongs to the proline racemase family.
 
  
  0.965
SFI59800.1
Ornithine cyclodeaminase.
 
     0.923
SFJ76205.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
  
 0.863
SFI87340.1
2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase).
  
 0.855
SFJ57347.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
  
 0.855
Your Current Organism:
Amycolatopsis sacchari
NCBI taxonomy Id: 115433
Other names: A. sacchari, Amycolatopsis sacchari Goodfellow et al. 2001, CIP 107029, DSM 44468, JCM 11272, KCTC 9863, NBRC 100339
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