STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFI61605.1Hypothetical protein. (205 aa)    
Predicted Functional Partners:
SFI61637.1
Inorganic phosphate transporter, PiT family.
 
  
 0.990
SFJ84662.1
Inorganic phosphate transporter, PiT family.
 
  
 0.955
SFI61563.1
Nucleoside-diphosphate-sugar epimerase.
  
    0.759
SFI61665.1
Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase.
       0.753
SFI61535.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
       0.526
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
   
    0.509
SFI61508.1
Hypothetical protein.
       0.507
rpmB
Large subunit ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.
  
    0.503
rpmB-2
Large subunit ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.
  
    0.503
SFK27635.1
Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
  
    0.450
Your Current Organism:
Amycolatopsis sacchari
NCBI taxonomy Id: 115433
Other names: A. sacchari, Amycolatopsis sacchari Goodfellow et al. 2001, CIP 107029, DSM 44468, JCM 11272, KCTC 9863, NBRC 100339
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.