STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFI63048.1Rieske [2Fe-2S] domain-containing protein. (335 aa)    
Predicted Functional Partners:
SFJ64889.1
SnoaL-like domain-containing protein.
  
 0.988
SFI63180.1
Isorenieratene synthase.
   
 0.915
SFI63204.1
Ubiquinone/menaquinone biosynthesis C-methylase UbiE.
 
  
 0.837
SFI63324.1
Phytoene synthase.
   
 0.828
SFJ42460.1
Cytochrome P450.
  
 
 0.801
SFJ81298.1
Ferredoxin-NADP reductase.
  
 
 0.801
SFI64845.1
CDP-4-dehydro-6-deoxyglucose reductase/3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit/phenol hydroxylase P5 protein.
  
 
 0.748
SFI63270.1
Lycopene cyclase domain-containing protein.
 
     0.714
SFK75955.1
Hypothetical protein.
 
 
 0.710
SFK32399.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
  
 
 0.688
Your Current Organism:
Amycolatopsis sacchari
NCBI taxonomy Id: 115433
Other names: A. sacchari, Amycolatopsis sacchari Goodfellow et al. 2001, CIP 107029, DSM 44468, JCM 11272, KCTC 9863, NBRC 100339
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