Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFI68914.1 | SFJ09250.1 | SAMN05421835_101459 | SAMN05421835_10350 | Membrane carboxypeptidase (penicillin-binding protein). | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family. | 0.784 |
SFI68914.1 | SFJ24052.1 | SAMN05421835_101459 | SAMN05421835_10412 | Membrane carboxypeptidase (penicillin-binding protein). | DivIVA domain-containing protein. | 0.761 |
SFI68914.1 | SFJ54178.1 | SAMN05421835_101459 | SAMN05421835_106167 | Membrane carboxypeptidase (penicillin-binding protein). | N-acetylmuramoyl-L-alanine amidase. | 0.729 |
SFI68914.1 | SFJ55904.1 | SAMN05421835_101459 | SAMN05421835_106236 | Membrane carboxypeptidase (penicillin-binding protein). | Peptidoglycan glycosyltransferase. | 0.695 |
SFI68914.1 | SFK22899.1 | SAMN05421835_101459 | SAMN05421835_11632 | Membrane carboxypeptidase (penicillin-binding protein). | DivIVA domain-containing protein. | 0.734 |
SFI68914.1 | SFK86053.1 | SAMN05421835_101459 | SAMN05421835_1396 | Membrane carboxypeptidase (penicillin-binding protein). | Cell division protein FtsI (penicillin-binding protein 3). | 0.781 |
SFI68914.1 | SFK86141.1 | SAMN05421835_101459 | SAMN05421835_13911 | Membrane carboxypeptidase (penicillin-binding protein). | Cell division protein FtsW; Belongs to the SEDS family. | 0.753 |
SFI68914.1 | SFK86309.1 | SAMN05421835_101459 | SAMN05421835_13920 | Membrane carboxypeptidase (penicillin-binding protein). | DivIVA domain-containing protein. | 0.834 |
SFI68914.1 | SFK86401.1 | SAMN05421835_101459 | SAMN05421835_13925 | Membrane carboxypeptidase (penicillin-binding protein). | NTF2-like N-terminal transpeptidase domain-containing protein. | 0.743 |
SFI68914.1 | SFK88373.1 | SAMN05421835_101459 | SAMN05421835_1419 | Membrane carboxypeptidase (penicillin-binding protein). | Cell division septum initiation DivIVA, interacts with FtsZ, MinD. | 0.761 |
SFJ09250.1 | SFI68914.1 | SAMN05421835_10350 | SAMN05421835_101459 | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family. | Membrane carboxypeptidase (penicillin-binding protein). | 0.784 |
SFJ09250.1 | SFJ54178.1 | SAMN05421835_10350 | SAMN05421835_106167 | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family. | N-acetylmuramoyl-L-alanine amidase. | 0.879 |
SFJ09250.1 | SFJ55904.1 | SAMN05421835_10350 | SAMN05421835_106236 | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family. | Peptidoglycan glycosyltransferase. | 0.697 |
SFJ09250.1 | SFK86053.1 | SAMN05421835_10350 | SAMN05421835_1396 | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family. | Cell division protein FtsI (penicillin-binding protein 3). | 0.681 |
SFJ09250.1 | SFK86141.1 | SAMN05421835_10350 | SAMN05421835_13911 | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family. | Cell division protein FtsW; Belongs to the SEDS family. | 0.440 |
SFJ09250.1 | SFK86401.1 | SAMN05421835_10350 | SAMN05421835_13925 | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family. | NTF2-like N-terminal transpeptidase domain-containing protein. | 0.688 |
SFJ24052.1 | SFI68914.1 | SAMN05421835_10412 | SAMN05421835_101459 | DivIVA domain-containing protein. | Membrane carboxypeptidase (penicillin-binding protein). | 0.761 |
SFJ54178.1 | SFI68914.1 | SAMN05421835_106167 | SAMN05421835_101459 | N-acetylmuramoyl-L-alanine amidase. | Membrane carboxypeptidase (penicillin-binding protein). | 0.729 |
SFJ54178.1 | SFJ09250.1 | SAMN05421835_106167 | SAMN05421835_10350 | N-acetylmuramoyl-L-alanine amidase. | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family. | 0.879 |
SFJ54178.1 | SFJ55904.1 | SAMN05421835_106167 | SAMN05421835_106236 | N-acetylmuramoyl-L-alanine amidase. | Peptidoglycan glycosyltransferase. | 0.413 |
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