STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFI69701.1Methyltransferase domain-containing protein. (266 aa)    
Predicted Functional Partners:
SFI69671.1
Glycosyltransferase Family 4.
     0.967
SFI69734.1
Uncharacterized membrane protein YbhN, UPF0104 family.
 
    0.961
SFI69645.1
6-pyruvoyl-tetrahydropterin synthase.
 
     0.960
SFI69617.1
Threonine dehydrogenase.
 
    0.951
SFI69589.1
Phosphatidylglycerophosphate synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
  
  0.931
SFJ39642.1
Phosphoglycerol transferase MdoB.
 
  
  0.821
SFJ38639.1
Hypothetical protein.
  
  0.698
SFJ85391.1
DNA helicase-2 / ATP-dependent DNA helicase PcrA.
    
 
 0.674
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
  0.642
SFI69758.1
Creatinine amidohydrolase.
  
     0.593
Your Current Organism:
Amycolatopsis sacchari
NCBI taxonomy Id: 115433
Other names: A. sacchari, Amycolatopsis sacchari Goodfellow et al. 2001, CIP 107029, DSM 44468, JCM 11272, KCTC 9863, NBRC 100339
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